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Electron Microscopy
Services
Equipment
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Electron Microscopy
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Samples
single particles and macromolecules (liposome, proteinosome,
microtubles
...)
tissue cultured cells (
HeLa
, MDCK, MEF, RPE, human pancreatic progenitor cells, human fibroblast…)
single cell organisms (bacteria,
yeast
, chlamydomonas, diatomes…)
various tissues from model systems
Drosophila
flatworms
C.elegans
zebrafish
mouse
organoids and spheroids (
brain
, pancreas, liver …)
others …
Methods:
Sample Preparation
Fixation
Chemical fixation
Physical fixation
Plunge freezing
High Pressure Freezing
(
in combination with Freeze substitution
)
Embedding
For morphological study
TEM samples
SEM samples
For functional and morphological study (immunolabeling)
Tokuyasu technique
[technique link]
[example link]
Embedding in acrylic resin
(at low temperature)
Ultramicrotomy
room temperature ultramicrotomy
semithin sectioning (500 nm-2 um, with
Toluidinblue Staining
)
ultrathin sectioning
(50-70 nm)
serial sectioning
sectioning for TEM tomography
(300 nm)
Ultramicrotomy in SBF-SEM
(3ViewXP)
FIB lamellae (under development)
cryo ultramicrotomy
Tokuyasu sectioing
(for immunolabelling)
CEMOVIS (under development)
FIB lamellae (under development)
Immuno EM
Pre embedding labelling (DAB, ultrasmall gold labelling with silver enhancement)
On-grid (post-embedding) labelling
on Tokuyasu sections
on plastic (methacrylate) sections
with negative contrasting (for isolated molecules or organelles)
CLEM (correlative light and electron microscopy)
room temperature light microscopic (LM) features with RT-TEM structure
room temperature LM features (endogenous or immunlabelling) with immunoEM
room temparature LM features with cryoEM
CryoLM with cryoEM (under development)
negative staining
can be used for single particles, macromolecular complexes, organelles, can be combined with
immunogoldlabelling
Image acquisition
2D imaging
conventional room temperature and cryo TEM
automated single particle acquisition (under development)
conventional SEM
3D volume
serial section analysis
TEM tomography
cryo TEM Tomography
serial blockface scanning electron microscope (SBF-SEM)
focussed ion beam scanning electron microscope (FIB-SEM) (room temperature and cryo)
CLEM
room temperature
cryo (under development)
Data analysis and modelling
Image Analysis (serial section alignment, SBF-stacks...) - Fiji, Imod Tomographic Reconstruction - Imod
Segmentation/Modelling of 3D structures from tomograms or volume imaging – Fiji, Imod
Stereology and quantification of features